Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyl-diaminopimelate desuccinylase | ABT58_02860 | Not Available | Positive | 631970 - 632188 | 8282.05 |
| carbohydrate-binding protein | ABT58_02865 | Not Available | Negative | 632485 - 634236 | 63753.1 |
| membrane protein | ABT58_02870 | Not Available | Negative | 635111 - 636436 | 48327.6 |
| arac family transcriptional regulator | ABT58_02880 | Not Available | Negative | 637612 - 638412 | 31073.2 |
| mechanosensitive ion channel protein mscs | ABT58_02885 | Not Available | Positive | 638719 - 639594 | 33393.0 |
| hypothetical protein | ABT58_02890 | Not Available | Negative | 639655 - 640317 | 24950.7 |
| hypothetical protein | ABT58_02895 | Not Available | Positive | 640454 - 640759 | 11207.8 |
| exonuclease | ABT58_02900 | Not Available | Positive | 640943 - 641482 | 20601.9 |
| hypothetical protein | ABT58_02905 | Not Available | Positive | 641859 - 642302 | 17133.0 |
| multidrug dmt transporter | ABT58_02910 | Not Available | Positive | 642612 - 643523 | 33018.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
