Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| msha biogenesis protein mshl | ABT58_02390 | Not Available | Negative | 534147 - 535781 | 57910.8 |
| hypothetical protein | ABT58_02395 | Not Available | Negative | 535799 - 536122 | 11838.4 |
| msha biogenesis protein mshj | ABT58_02400 | Not Available | Negative | 536127 - 536786 | 24540.6 |
| diguanylate phosphodiesterase | ABT58_02410 | Not Available | Negative | 538446 - 540413 | 74193.1 |
| lysr family transcriptional regulator | ABT58_02415 | Not Available | Positive | 540714 - 541625 | 33728.4 |
| hypothetical protein | ABT58_02420 | Not Available | Positive | 541752 - 542954 | 42477.4 |
| single-stranded dna-binding protein | ABT58_02425 | Not Available | Negative | 543221 - 543778 | 20422.7 |
| excinuclease abc subunit a | ABT58_02430 | Not Available | Positive | 544059 - 546902 | 104257.0 |
| ligase | ABT58_02435 | Not Available | Positive | 547003 - 548760 | 66389.6 |
| alanine--glyoxylate aminotransferase | ABT58_02440 | Not Available | Negative | 548841 - 549959 | 40265.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
