Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c | ABT58_02140 | Not Available | Negative | 484867 - 485604 | 27579.2 |
| cytochrome b | ABT58_02145 | Not Available | Negative | 485601 - 486866 | 48131.6 |
| ubiquinol-cytochrome c reductase | ABT58_02150 | Not Available | Negative | 486866 - 487456 | 20847.8 |
| 30s ribosomal protein s9 | ABT58_02155 | Not Available | Negative | 487897 - 488289 | 14786.1 |
| 50s ribosomal protein l13 | ABT58_02160 | Not Available | Negative | 488305 - 488733 | 15809.4 |
| atpase | ABT58_02165 | Not Available | Negative | 489011 - 490111 | 42147.3 |
| membrane protein | ABT58_02170 | Not Available | Positive | 490338 - 490769 | 16075.9 |
| serine endoprotease degq | ABT58_02175 | Not Available | Positive | 490903 - 492273 | 48026.9 |
| peptidase | ABT58_02180 | Not Available | Positive | 492470 - 493540 | 38653.6 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | ABT58_02185 | Not Available | Negative | 493697 - 494953 | 44345.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
