Photobacterium aphoticum

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium aphoticum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium aphoticum DNA, contig: contig00056, strain: JCM

Gene Summary

Adenine Count

1355547 bp

Thymine Count

1364935 bp

Guanine Count

1392623 bp

Cytosine Count

1299193 bp

Genome Length

5412298 bp

Protein-coding Genes

6938 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cell division protein ftszABT58_02040Not AvailableNegative462847 - 46403140993.2
cell division protein ftsaABT58_02045Not AvailableNegative464066 - 46532244634.6
cell division protein ftsqABT58_02050Not AvailableNegative465377 - 46613528500.3
udp-n-acetylmuramate--alanine ligaseABT58_02055Not AvailableNegative466400 - 46786052962.3
udp-diphospho-muramoylpentapeptide beta-n- acetylglucosaminyltransferaseABT58_02060Not AvailableNegative467875 - 46893938018.1
cell division protein ftswABT58_02065Not AvailableNegative468926 - 47014944658.8
udp-n-acetylmuramoyl-l-alanyl-d-glutamate synthetaseABT58_02070Not AvailableNegative470149 - 47148647292.9
phospho-n-acetylmuramoyl-pentapeptide- transferaseABT58_02075Not AvailableNegative471487 - 47256940047.3
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseABT58_02080Not AvailableNegative472566 - 47394848561.8
udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligaseABT58_02085Not AvailableNegative473945 - 47545653309.6

Displaying genes 7441 – 7450 of 11511 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.