Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| general secretion pathway protein gspe | ABT58_01990 | Not Available | Positive | 451552 - 453249 | 62239.9 |
| type ii secretion system protein f | ABT58_01995 | Not Available | Positive | 453355 - 454575 | 44974.9 |
| methyltransferase | ABT58_02000 | Not Available | Positive | 454696 - 455580 | 32348.1 |
| dephospho-coa kinase | ABT58_02005 | Not Available | Positive | 455585 - 456190 | 21992.5 |
| cell division protein zapd | ABT58_02010 | Not Available | Positive | 456351 - 457088 | 28375.4 |
| dna gyrase inhibitor | ABT58_02015 | Not Available | Positive | 457096 - 457311 | 7859.14 |
| 7,8-dihydro-8-oxoguanine-triphosphatase | ABT58_02020 | Not Available | Negative | 457427 - 457840 | 15394.2 |
| preprotein translocase subunit seca | ABT58_02025 | Not Available | Negative | 457990 - 460716 | 103521.0 |
| hypothetical protein | ABT58_02030 | Not Available | Positive | 461152 - 461610 | 17122.9 |
| udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase | ABT58_02035 | Not Available | Negative | 461814 - 462731 | 33893.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
