Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein chec - inhibitor of mcp methylation | JCM19237_5602 | Not Available | Positive | 524887 - 525744 | 31686.6 |
| hypothetical protein | JCM19237_5603 | Not Available | Positive | 525749 - 526180 | 16701.2 |
| outer membrane protein a precursor | JCM19237_5604 | Not Available | Positive | 526501 - 527487 | 35912.9 |
| sodium/dicarboxylate symporter | JCM19237_5605 | Not Available | Negative | 527597 - 528769 | 40460.1 |
| batd protein | JCM19237_5606 | Not Available | Negative | 529137 - 529955 | 30308.4 |
| batd protein | JCM19237_5607 | Not Available | Negative | 529952 - 530554 | 21923.3 |
| batd protein | JCM19237_5608 | Not Available | Negative | 530548 - 530760 | 7426.66 |
| tpr domain protein in aerotolerance operon | JCM19237_5609 | Not Available | Negative | 530849 - 532060 | 43989.6 |
| tpr domain protein in aerotolerance operon | JCM19237_5610 | Not Available | Negative | 532080 - 532808 | 26594.1 |
| bata bacteroides aerotolerance operon | JCM19237_5611 | Not Available | Negative | 532838 - 533551 | 26459.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
