Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase | ABT58_01105 | Not Available | Negative | 253828 - 254394 | 20950.1 |
| hypothetical protein | ABT58_01110 | Not Available | Negative | 254491 - 254964 | 18227.8 |
| dna processing protein dpra | ABT58_01115 | Not Available | Negative | 254967 - 256061 | 39011.9 |
| peptigoglycan-binding protein lysm | ABT58_01120 | Not Available | Negative | 256054 - 257118 | 39740.8 |
| peptide deformylase | ABT58_01125 | Not Available | Positive | 257422 - 257937 | 19273.2 |
| methionyl-trna formyltransferase | ABT58_01130 | Not Available | Positive | 257965 - 258909 | 33990.9 |
| 16s rrna methyltransferase | ABT58_01135 | Not Available | Positive | 259009 - 260289 | 47823.4 |
| potassium transporter peripheral membrane component | ABT58_01140 | Not Available | Positive | 260475 - 261851 | 50355.7 |
| potassium transporter trkh | ABT58_01145 | Not Available | Positive | 261857 - 263302 | 52005.4 |
| hemolysin | ABT58_01150 | Not Available | Negative | 263392 - 264054 | 23953.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
