Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-alpha-glucanotransferase | JCM19237_5582 | Not Available | Positive | 508820 - 509023 | 7694.1 |
| 4-alpha-glucanotransferase | JCM19237_5583 | Not Available | Positive | 509046 - 511001 | 73643.3 |
| 1,4-alpha-glucan (glycogen) branching enzyme gh-13-type | JCM19237_5584 | Not Available | Positive | 511136 - 511837 | 26632.2 |
| 1,4-alpha-glucan (glycogen) branching enzyme gh-13-type | JCM19237_5585 | Not Available | Positive | 511834 - 512628 | 30719.8 |
| 1,4-alpha-glucan (glycogen) branching enzyme gh-13-type | JCM19237_5586 | Not Available | Positive | 512634 - 513206 | 21481.4 |
| hypothetical protein | JCM19237_5587 | Not Available | Negative | 513302 - 514087 | 29707.7 |
| isopentenyl-diphosphate delta-isomerase | JCM19237_5588 | Not Available | Negative | 514297 - 515397 | 40876.9 |
| isopentenyl-diphosphate delta-isomerase | JCM19237_5589 | Not Available | Negative | 515397 - 515942 | 21169.3 |
| hypothetical protein | JCM19237_5590 | Not Available | Positive | 516197 - 516436 | 9165.54 |
| signal transduction histidine kinase | JCM19237_5591 | Not Available | Negative | 516768 - 518108 | 49789.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
