Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c factor cell-cell signaling protein | ABT58_00120 | Not Available | Negative | 31486 - 32214 | 26235.3 |
| short chain dehydrogenase | ABT58_00125 | Not Available | Positive | 32480 - 33175 | 24353.5 |
| protein tyrosine phosphatase | ABT58_00130 | Not Available | Positive | 33257 - 33718 | 16983.2 |
| sulfate permease | ABT58_00135 | Not Available | Negative | 33902 - 35458 | 54983.5 |
| ribonuclease | ABT58_00140 | Not Available | Negative | 35739 - 39101 | 123961.0 |
| pseudouridine synthase | ABT58_00145 | Not Available | Positive | 39540 - 40484 | 35700.5 |
| septum formation inhibitor maf | ABT58_00150 | Not Available | Negative | 40580 - 41161 | 21272.7 |
| ribosomal protein l32p | ABT58_00155 | Not Available | Positive | 41486 - 41998 | 19109.5 |
| 50s ribosomal protein l32 | ABT58_00160 | Not Available | Positive | 42023 - 42193 | 6165.34 |
| phosphate acyltransferase | ABT58_00165 | Not Available | Positive | 42203 - 43228 | 36766.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
