Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | JCM19237_1359 | Not Available | Positive | 5406302 - 5406499 | 6257.0 |
| hypothetical protein | JCM19237_1360 | Not Available | Positive | 5406496 - 5407140 | 21690.8 |
| hypothetical protein | JCM19237_2653 | Not Available | Positive | 5407636 - 5408532 | 30024.9 |
| hypothetical protein | JCM19237_3099 | Not Available | Positive | 5411767 - 5411943 | 6442.58 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 110 - 1668 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 191 - 285 | Not Available |
| 6-o-methylguanine dna methyltransferase | ABT58_00005 | Not Available | Negative | 160 - 636 | 17776.2 |
| ribosomal-protein-alanine acetyltransferase | ABT58_00010 | Not Available | Positive | 800 - 1384 | 22712.1 |
| amino acid abc transporter permease | ABT58_00015 | Not Available | Negative | 1520 - 3241 | 63086.1 |
| cysteine abc transporter atp-binding protein | ABT58_00020 | Not Available | Negative | 3234 - 5006 | 65271.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
