Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxynorspermidine decarboxylase putative | JCM19237_4009 | Not Available | Negative | 5382145 - 5383287 | 41960.9 |
| carboxynorspermidine dehydrogenase putative | JCM19237_4010 | Not Available | Negative | 5383457 - 5384701 | 46059.9 |
| diaminobutyrate-2-oxoglutarate aminotransferase | JCM19237_4011 | Not Available | Negative | 5384803 - 5387703 | 105373.0 |
| Trna-cys | Not Available | Not Available | Positive | 5388627 - 5388699 | Not Available |
| glutathione s-transferase | JCM19237_6742 | Not Available | Negative | 5388900 - 5389526 | 23956.7 |
| chitinase | JCM19237_6743 | Not Available | Negative | 5389680 - 5390591 | 32988.1 |
| spindolin-related protein | JCM19237_6744 | Not Available | Negative | 5390612 - 5391100 | 17690.0 |
| n-acetylglucosamine regulated methyl-accepting chemotaxis protein | JCM19237_6745 | Not Available | Negative | 5391360 - 5392997 | 58957.7 |
| Trna-asn | Not Available | Not Available | Positive | 5393218 - 5393293 | Not Available |
| Trna-phe | Not Available | Not Available | Positive | 5393300 - 5393374 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
