Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i secretion system outer membrane component lape | JCM19237_2919 | Not Available | Positive | 5358862 - 5360166 | 48828.9 |
| outer membrane lipoprotein omp16 precursor | JCM19237_2920 | Not Available | Positive | 5360251 - 5360784 | 19574.2 |
| hypothetical protein | JCM19237_2921 | Not Available | Positive | 5360874 - 5361461 | 22439.9 |
| membrane bound c-di-gmp receptor lapd | JCM19237_2922 | Not Available | Positive | 5361463 - 5363382 | 72590.2 |
| inositol-1-monophosphatase | JCM19237_749 | Not Available | Negative | 5366391 - 5367191 | 28873.6 |
| trna:cm32/um32 methyltransferase | JCM19237_750 | Not Available | Positive | 5367648 - 5368166 | 19915.0 |
| iron-sulfur cluster regulator iscr | JCM19237_751 | Not Available | Positive | 5368319 - 5368786 | 16703.7 |
| cysteine desulfurase iscs subfamily | JCM19237_752 | Not Available | Positive | 5368818 - 5369342 | 19504.3 |
| cysteine desulfurase iscs subfamily | JCM19237_753 | Not Available | Positive | 5369563 - 5370030 | 17301.6 |
| iron-sulfur cluster assembly scaffold protein iscu | JCM19237_754 | Not Available | Positive | 5370064 - 5370453 | 13859.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
