Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssu ribosomal protein s11p | JCM19237_716 | Not Available | Positive | 5337431 - 5337730 | 10598.9 |
| ssu ribosomal protein s4p | JCM19237_717 | Not Available | Positive | 5337859 - 5338467 | 22798.6 |
| dna-directed rna polymerase alpha subunit | JCM19237_718 | Not Available | Positive | 5338491 - 5339444 | 35002.0 |
| lsu ribosomal protein l17p | JCM19237_719 | Not Available | Positive | 5339513 - 5339899 | 14546.7 |
| membrane-bound lytic murein transglycosylase c precursor | JCM19237_1 | Not Available | Negative | 5340681 - 5341844 | 43884.1 |
| probable fe(2+)-trafficking protein yggx | JCM19237_2 | Not Available | Negative | 5341960 - 5342232 | 10542.7 |
| 5'-methylthioadenosine nucleosidase | JCM19237_3 | Not Available | Negative | 5342332 - 5343003 | 24061.9 |
| a/g-specific adenine glycosylase | JCM19237_4 | Not Available | Negative | 5343218 - 5343397 | 6420.55 |
| a/g-specific adenine glycosylase | JCM19237_5 | Not Available | Negative | 5343439 - 5343591 | 5578.54 |
| a/g-specific adenine glycosylase | JCM19237_6 | Not Available | Negative | 5343593 - 5344090 | 18389.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
