Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fkbp-type peptidyl-prolyl cis-trans isomerase slyd | JCM19237_3373 | Not Available | Positive | 5316123 - 5316689 | 19775.0 |
| protein slyx | JCM19237_3374 | Not Available | Negative | 5316792 - 5317013 | 8457.16 |
| wd40 repeat | JCM19237_3375 | Not Available | Negative | 5317018 - 5317497 | 17437.1 |
| wd40 repeat | JCM19237_3376 | Not Available | Negative | 5317530 - 5317976 | 16157.0 |
| fkbp-type peptidyl-prolyl cis-trans isomerase fkpa precursor | JCM19237_3377 | Not Available | Positive | 5318191 - 5319006 | 28830.1 |
| yheo-like pas domain | JCM19237_3378 | Not Available | Positive | 5319298 - 5320020 | 26790.9 |
| trna 5-methylaminomethyl-2-thiouridine synthase tusd | JCM19237_3379 | Not Available | Positive | 5320017 - 5320409 | 13946.3 |
| trna 5-methylaminomethyl-2-thiouridine synthase tusc | JCM19237_3380 | Not Available | Positive | 5320421 - 5320777 | 12964.6 |
| trna 5-methylaminomethyl-2-thiouridine synthase tusb | JCM19237_3381 | Not Available | Positive | 5320785 - 5321078 | 10616.9 |
| ssu ribosomal protein s12p | JCM19237_3382 | Not Available | Positive | 5321257 - 5321631 | 13709.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
