Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 1 | JCM19237_6893 | Not Available | Negative | 5280241 - 5281329 | 40612.8 |
| glutamyl-trna reductase | JCM19237_6894 | Not Available | Negative | 5281408 - 5281704 | 10705.9 |
| glutamyl-trna reductase | JCM19237_6895 | Not Available | Negative | 5281701 - 5282363 | 24515.7 |
| glutamyl-trna reductase | JCM19237_6896 | Not Available | Negative | 5282321 - 5282668 | 12769.3 |
| outer membrane lipoprotein lolb precursor | JCM19237_6897 | Not Available | Positive | 5282907 - 5283545 | 24061.9 |
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | JCM19237_6898 | Not Available | Positive | 5283554 - 5284417 | 31345.4 |
| ribose-phosphate pyrophosphokinase | JCM19237_6899 | Not Available | Positive | 5284450 - 5285397 | 34264.3 |
| peptidyl-trna hydrolase | JCM19237_6900 | Not Available | Positive | 5285568 - 5286158 | 21351.8 |
| gtp-binding and nucleic acid-binding protein ychf | JCM19237_6901 | Not Available | Positive | 5286267 - 5287331 | 38830.3 |
| potassium efflux system kefa protein | JCM19237_720 | Not Available | Positive | 5287845 - 5289665 | 69744.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
