Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylgalactosaminyltransferase | JCM19237_3992 | Not Available | Negative | 5246232 - 5246585 | 13005.0 |
| udp-glucose 4-epimerase | JCM19237_3993 | Not Available | Negative | 5246689 - 5247609 | 33674.5 |
| alpha-l-rha alpha-1,3-l-rhamnosyltransferase | JCM19237_3994 | Not Available | Negative | 5247606 - 5248517 | 34792.1 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | JCM19237_3995 | Not Available | Negative | 5248514 - 5249071 | 21026.9 |
| dtdp-4-dehydrorhamnose reductase | JCM19237_3996 | Not Available | Negative | 5249150 - 5250001 | 30491.0 |
| glucose-1-phosphate thymidylyltransferase | JCM19237_3997 | Not Available | Negative | 5250071 - 5250949 | 32529.8 |
| dtdp-glucose 4,6-dehydratase | JCM19237_3998 | Not Available | Negative | 5250959 - 5252041 | 40364.6 |
| hypothetical protein | JCM19237_3999 | Not Available | Negative | 5253322 - 5254479 | 43880.4 |
| n-acetylneuraminate synthase | JCM19237_4000 | Not Available | Negative | 5256945 - 5257946 | 36820.0 |
| n-acetylneuraminate cytidylyltransferase | JCM19237_4001 | Not Available | Negative | 5258488 - 5259423 | 35154.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
