Photobacterium aphoticum

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium aphoticum
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium aphoticum DNA, contig: contig00056, strain: JCM

Gene Summary

Adenine Count

1355547 bp

Thymine Count

1364935 bp

Guanine Count

1392623 bp

Cytosine Count

1299193 bp

Genome Length

5412298 bp

Protein-coding Genes

6938 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinJCM19237_4047Not AvailableNegative5237730 - 52378494789.84
abc-type protease exporter membrane fusion protein (mfp) family component prte/apreJCM19237_4048Not AvailableNegative5237882 - 523845121233.9
t1ss secreted agglutinin rtxJCM19237_4049Not AvailablePositive5238732 - 523981738191.6
t1ss secreted agglutinin rtxJCM19237_4050Not AvailablePositive5239769 - 52399787398.51
t1ss secreted agglutinin rtxJCM19237_4051Not AvailablePositive5239975 - 524105737911.3
n-acetylglucosamine-1-phosphate uridyltransferaseJCM19237_3987Not AvailableNegative5242585 - 52427284877.0
n-acetylglucosamine-1-phosphate uridyltransferaseJCM19237_3988Not AvailableNegative5242728 - 524321016998.2
n-acetylglucosamine-1-phosphate uridyltransferaseJCM19237_3989Not AvailableNegative5243210 - 524387824307.1
nucleoside-diphosphate sugar epimeraseJCM19237_3990Not AvailableNegative5244131 - 524555551608.5
nucleoside-diphosphate sugar epimeraseJCM19237_3991Not AvailableNegative5245558 - 524598315416.3

Displaying genes 6821 – 6830 of 11511 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.