Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside diphosphate kinase | JCM19237_4017 | Not Available | Positive | 5217233 - 5217421 | 6918.61 |
| nucleoside diphosphate kinase | JCM19237_4018 | Not Available | Positive | 5217421 - 5217660 | 8622.1 |
| ribosomal rna large subunit methyltransferase n | JCM19237_4019 | Not Available | Positive | 5217921 - 5218511 | 22158.8 |
| ribosomal rna large subunit methyltransferase n | JCM19237_4020 | Not Available | Positive | 5218508 - 5218879 | 13623.3 |
| ribosomal rna large subunit methyltransferase n | JCM19237_4021 | Not Available | Positive | 5218876 - 5219040 | 6071.31 |
| type iv pilus biogenesis protein pilf | JCM19237_4022 | Not Available | Positive | 5219125 - 5219868 | 28227.3 |
| putative membrane protein | JCM19237_4023 | Not Available | Positive | 5219915 - 5220625 | 26138.6 |
| putative membrane protein | JCM19237_4024 | Not Available | Positive | 5220598 - 5220846 | 8786.72 |
| 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase | JCM19237_4025 | Not Available | Positive | 5220861 - 5221700 | 30264.7 |
| 1-hydroxy-2-methyl-2-(e)-butenyl 4-diphosphate synthase | JCM19237_4026 | Not Available | Positive | 5221697 - 5221894 | 6891.46 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
