Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c heme lyase subunit ccmh | JCM19237_399 | Not Available | Positive | 5203090 - 5203407 | 11293.6 |
| lipoprotein | JCM19237_400 | Not Available | Positive | 5203660 - 5204643 | 36318.1 |
| putative transporting atpase | JCM19237_401 | Not Available | Positive | 5205081 - 5205485 | 15312.9 |
| hypothetical protein | JCM19237_402 | Not Available | Positive | 5205454 - 5205606 | 5661.96 |
| hypothetical protein | JCM19237_403 | Not Available | Positive | 5205841 - 5206107 | 9546.27 |
| hypothetical protein | JCM19237_404 | Not Available | Negative | 5206271 - 5206486 | 8117.01 |
| putative outer membrane lipoprotein ymca | JCM19237_405 | Not Available | Negative | 5206775 - 5208007 | 46092.6 |
| putative outer membrane lipoprotein ymca | JCM19237_406 | Not Available | Negative | 5208007 - 5208651 | 24274.2 |
| yjbh outer membrane lipoprotein | JCM19237_407 | Not Available | Negative | 5208633 - 5208962 | 12274.7 |
| yjbg polysaccharide synthesis-related protein | JCM19237_408 | Not Available | Negative | 5208962 - 5209498 | 19289.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
