Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter | JCM19237_389 | Not Available | Positive | 5196608 - 5196919 | 11708.8 |
| abc transporter | JCM19237_390 | Not Available | Positive | 5196898 - 5197272 | 12844.6 |
| cytochrome c-type biogenesis protein ccmc | JCM19237_391 | Not Available | Positive | 5197583 - 5198314 | 27415.1 |
| cytochrome c-type biogenesis protein ccmd | JCM19237_392 | Not Available | Positive | 5198322 - 5198528 | 7790.42 |
| cytochrome c-type biogenesis protein ccme | JCM19237_393 | Not Available | Positive | 5198525 - 5199013 | 17708.4 |
| cytochrome c heme lyase subunit ccmf | JCM19237_394 | Not Available | Positive | 5199120 - 5199392 | 10320.7 |
| cytochrome c heme lyase subunit ccmf | JCM19237_395 | Not Available | Positive | 5199356 - 5200996 | 60436.3 |
| thiol:disulfide oxidoreductase | JCM19237_396 | Not Available | Positive | 5200996 - 5201571 | 21709.4 |
| cytochrome c heme lyase subunit ccml | JCM19237_397 | Not Available | Positive | 5201568 - 5202194 | 22968.6 |
| cytochrome c heme lyase subunit ccmh | JCM19237_398 | Not Available | Positive | 5202200 - 5203093 | 33694.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
