Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemolysins and related proteins containing cbs domains | JCM19237_3400 | Not Available | Negative | 5157699 - 5158226 | 19786.9 |
| hemolysins and related proteins containing cbs domains | JCM19237_3401 | Not Available | Negative | 5158196 - 5158447 | 9123.12 |
| hemolysins and related proteins containing cbs domains | JCM19237_3402 | Not Available | Negative | 5158468 - 5158821 | 12635.1 |
| glutamate synthase | JCM19237_3403 | Not Available | Negative | 5159067 - 5159864 | 29208.2 |
| signal recognition particle subunit ffh srp54 | JCM19237_3404 | Not Available | Positive | 5160078 - 5161226 | 41920.9 |
| signal recognition particle subunit ffh srp54 | JCM19237_3405 | Not Available | Positive | 5161202 - 5161441 | 9011.6 |
| ssu ribosomal protein s16p | JCM19237_3406 | Not Available | Positive | 5161626 - 5161874 | 9118.07 |
| 16s rrna processing protein rimm | JCM19237_3407 | Not Available | Positive | 5161899 - 5162426 | 19938.7 |
| trna (guanine37-n1) -methyltransferase | JCM19237_3408 | Not Available | Positive | 5162448 - 5163194 | 27777.2 |
| lsu ribosomal protein l19p | JCM19237_3409 | Not Available | Positive | 5163231 - 5163581 | 13117.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
