Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-export membrane protein secd | JCM19237_3154 | Not Available | Positive | 5069249 - 5070253 | 36267.3 |
| protein-export membrane protein secd | JCM19237_3155 | Not Available | Positive | 5070277 - 5070417 | 4742.04 |
| protein-export membrane protein secf | JCM19237_3156 | Not Available | Positive | 5070430 - 5071377 | 34348.2 |
| Trna-cys | Not Available | Not Available | Positive | 5071690 - 5071763 | Not Available |
| ggdef domain | JCM19237_105 | Not Available | Positive | 5072202 - 5072861 | 25642.8 |
| hypothetical protein | JCM19237_106 | Not Available | Positive | 5073046 - 5073840 | 30199.1 |
| aspartate-ammonia ligase | JCM19237_107 | Not Available | Negative | 5073903 - 5074388 | 17917.3 |
| aspartate-ammonia ligase | JCM19237_108 | Not Available | Negative | 5074385 - 5074909 | 20550.3 |
| hypothetical protein | JCM19237_109 | Not Available | Positive | 5075537 - 5075824 | 10410.3 |
| hypothetical protein | JCM19237_110 | Not Available | Negative | 5075909 - 5077678 | 67905.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
