Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | JCM19237_3134 | Not Available | Negative | 5053969 - 5054637 | 23636.6 |
| polyphosphate kinase 2 | JCM19237_3135 | Not Available | Negative | 5055053 - 5055742 | 27102.5 |
| cytoplasmic copper homeostasis protein cutc | JCM19237_3136 | Not Available | Negative | 5056032 - 5056640 | 21547.1 |
| cytoplasmic copper homeostasis protein cutc | JCM19237_3137 | Not Available | Negative | 5056640 - 5056768 | 4430.37 |
| alkyl hydroperoxide reductase subunit c-like protein | JCM19237_3138 | Not Available | Negative | 5057061 - 5057669 | 22286.4 |
| hydrogen peroxide-inducible genes activator | JCM19237_3139 | Not Available | Positive | 5057801 - 5058700 | 33320.5 |
| hypothetical protein | JCM19237_3140 | Not Available | Positive | 5059118 - 5059234 | 4218.32 |
| malate synthase | JCM19237_3141 | Not Available | Positive | 5059324 - 5059635 | 11869.4 |
| malate synthase | JCM19237_3142 | Not Available | Positive | 5059655 - 5060929 | 47705.0 |
| isocitrate lyase | JCM19237_3143 | Not Available | Positive | 5061123 - 5062427 | 47690.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
