Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enterobactin receptor vcta | JCM19237_3104 | Not Available | Positive | 5028772 - 5030262 | 55568.7 |
| murein endopeptidase | JCM19237_3105 | Not Available | Positive | 5030411 - 5031259 | 31595.1 |
| 4fe-4s ferredoxin iron-sulfur binding | JCM19237_3106 | Not Available | Negative | 5031360 - 5031575 | 7892.26 |
| putative protease | JCM19237_3107 | Not Available | Negative | 5031620 - 5031862 | 8932.65 |
| putative protease | JCM19237_3108 | Not Available | Negative | 5031859 - 5033016 | 43276.8 |
| dna recombination-dependent growth factor c | JCM19237_3109 | Not Available | Negative | 5033242 - 5033661 | 15579.4 |
| dna recombination-dependent growth factor c | JCM19237_3110 | Not Available | Negative | 5033658 - 5034155 | 19101.6 |
| exonuclease sbcd | JCM19237_3111 | Not Available | Positive | 5034397 - 5035548 | 42606.2 |
| exonuclease sbcc | JCM19237_3112 | Not Available | Positive | 5035563 - 5036237 | 24634.4 |
| exonuclease sbcc | JCM19237_3113 | Not Available | Positive | 5036249 - 5036968 | 27052.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
