Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-2-macroglobulin | JCM19237_790 | Not Available | Positive | 5005663 - 5007621 | 72306.2 |
| hypothetical protein | JCM19237_791 | Not Available | Positive | 5007612 - 5007869 | 10222.5 |
| alpha-2-macroglobulin | JCM19237_792 | Not Available | Positive | 5007836 - 5008993 | 42369.1 |
| alpha-2-macroglobulin | JCM19237_793 | Not Available | Positive | 5008990 - 5010282 | 48041.5 |
| penicillin-insensitive transglycosylase & transpeptidase pbp-1c | JCM19237_794 | Not Available | Positive | 5010460 - 5011446 | 37220.4 |
| penicillin-insensitive transglycosylase & transpeptidase pbp-1c | JCM19237_795 | Not Available | Positive | 5011425 - 5012570 | 41725.8 |
| hypothetical protein | JCM19237_796 | Not Available | Positive | 5012534 - 5012650 | 4695.86 |
| pts system fructose-specific iib /iic component | JCM19237_797 | Not Available | Positive | 5012800 - 5013699 | 31712.3 |
| pts system fructose-specific iib /iic component | JCM19237_798 | Not Available | Positive | 5013684 - 5013803 | 4263.15 |
| pts system fructose-specific iib /iic component | JCM19237_799 | Not Available | Positive | 5013899 - 5014357 | 15715.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
