Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate synthase | JCM19237_63 | Not Available | Negative | 4948103 - 4948513 | 14613.7 |
| 4-hydroxy-tetrahydrodipicolinate synthase | JCM19237_64 | Not Available | Negative | 4948474 - 4948983 | 17971.5 |
| glycine cleavage system transcriptional antiactivator gcvr | JCM19237_65 | Not Available | Positive | 4949226 - 4949765 | 20132.1 |
| thiol peroxidase bcp-type | JCM19237_66 | Not Available | Positive | 4949775 - 4950245 | 17355.8 |
| putative permease perm | JCM19237_67 | Not Available | Negative | 4950354 - 4951430 | 39468.7 |
| hypothetical protein | JCM19237_68 | Not Available | Negative | 4951437 - 4951556 | 4367.32 |
| hypothetical protein | JCM19237_69 | Not Available | Positive | 4951834 - 4952091 | 8806.66 |
| exported zinc metalloprotease yfgc precursor | JCM19237_70 | Not Available | Positive | 4952043 - 4953335 | 48016.1 |
| arsenate reductase | JCM19237_71 | Not Available | Positive | 4953481 - 4953831 | 12917.8 |
| flavoprotein wrba | JCM19237_72 | Not Available | Positive | 4953845 - 4954423 | 20508.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
