Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps-assembly lipoprotein rlpb precursor | JCM19237_43 | Not Available | Positive | 4936866 - 4937528 | 24907.7 |
| dna polymerase iii delta subunit | JCM19237_44 | Not Available | Positive | 4937605 - 4938558 | 36543.7 |
| ribosomal silencing factor rsfa | JCM19237_45 | Not Available | Positive | 4938723 - 4939040 | 11835.1 |
| lsu m3psi1915 methyltransferase rlmh | JCM19237_46 | Not Available | Positive | 4939080 - 4939517 | 16314.7 |
| penicillin-binding protein 2 | JCM19237_47 | Not Available | Positive | 4939524 - 4940243 | 27367.3 |
| penicillin-binding protein 2 | JCM19237_48 | Not Available | Positive | 4940249 - 4940602 | 12874.7 |
| penicillin-binding protein 2 | JCM19237_49 | Not Available | Positive | 4940700 - 4941479 | 29067.2 |
| rod shape-determining protein roda | JCM19237_50 | Not Available | Positive | 4941476 - 4941793 | 11476.8 |
| rod shape-determining protein roda | JCM19237_51 | Not Available | Positive | 4941850 - 4942326 | 17262.6 |
| rod shape-determining protein roda | JCM19237_52 | Not Available | Positive | 4942358 - 4942594 | 8313.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
