Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sodium-type flagellar protein motx | JCM19237_3730 | Not Available | Positive | 4882165 - 4882794 | 23710.6 |
| flavohemoprotein | JCM19237_3731 | Not Available | Negative | 4882927 - 4884111 | 43145.1 |
| nitrite-sensitive transcriptional repressor nsrr | JCM19237_3732 | Not Available | Positive | 4884307 - 4884648 | 12425.3 |
| 3'-to-5' exoribonuclease rnase r | JCM19237_3733 | Not Available | Positive | 4884770 - 4885153 | 14830.0 |
| 3'-to-5' exoribonuclease rnase r | JCM19237_3734 | Not Available | Positive | 4885141 - 4885704 | 21037.3 |
| 3'-to-5' exoribonuclease rnase r | JCM19237_3735 | Not Available | Positive | 4885713 - 4887338 | 61460.6 |
| 23s rrna (guanosine-2'-o-) -methyltransferase rlmb | JCM19237_3736 | Not Available | Positive | 4887354 - 4887644 | 10946.5 |
| 23s rrna (guanosine-2'-o-) -methyltransferase rlmb | JCM19237_3737 | Not Available | Positive | 4887608 - 4888075 | 16206.8 |
| ssu ribosomal protein s6p | JCM19237_3738 | Not Available | Positive | 4888458 - 4888787 | 12627.0 |
| primosomal replication protein n | JCM19237_3739 | Not Available | Positive | 4888794 - 4889096 | 11078.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
