Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair protein mutl | JCM19237_3720 | Not Available | Positive | 4873894 - 4875021 | 39266.1 |
| dna mismatch repair protein mutl | JCM19237_3721 | Not Available | Positive | 4875018 - 4875395 | 14224.3 |
| trna dimethylallyltransferase | JCM19237_3722 | Not Available | Positive | 4875522 - 4876322 | 29859.8 |
| rna-binding protein hfq | JCM19237_3723 | Not Available | Positive | 4876408 - 4876677 | 10064.1 |
| gtp-binding protein hflx | JCM19237_3724 | Not Available | Positive | 4876704 - 4877597 | 33512.5 |
| gtp-binding protein hflx | JCM19237_3725 | Not Available | Positive | 4877552 - 4877971 | 15905.3 |
| hflk protein | JCM19237_3726 | Not Available | Positive | 4878048 - 4879202 | 42241.4 |
| hflc protein | JCM19237_3727 | Not Available | Positive | 4879205 - 4880254 | 39219.8 |
| putative inner membrane protein yjet | JCM19237_3728 | Not Available | Positive | 4880399 - 4880593 | 7080.86 |
| adenylosuccinate synthetase | JCM19237_3729 | Not Available | Positive | 4880810 - 4882033 | 44328.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
