Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | Positive | 4866868 - 4866958 | Not Available |
| epoxyqueuosine (oq) reductase queg | JCM19237_3711 | Not Available | Negative | 4867747 - 4868391 | 23924.6 |
| epoxyqueuosine (oq) reductase queg | JCM19237_3712 | Not Available | Negative | 4868451 - 4868930 | 18482.2 |
| hypothetical protein | JCM19237_3713 | Not Available | Negative | 4869035 - 4869496 | 17186.2 |
| nad(p)hx epimerase | JCM19237_3714 | Not Available | Positive | 4869538 - 4869804 | 9269.93 |
| nad(p)hx epimerase | JCM19237_3715 | Not Available | Positive | 4869880 - 4870854 | 34061.7 |
| tsae protein | JCM19237_3716 | Not Available | Positive | 4870863 - 4871060 | 7073.29 |
| tsae protein | JCM19237_3717 | Not Available | Positive | 4871087 - 4871326 | 9308.03 |
| n-acetylmuramoyl-l-alanine amidase | JCM19237_3718 | Not Available | Positive | 4871394 - 4873058 | 60501.7 |
| dna mismatch repair protein mutl | JCM19237_3719 | Not Available | Positive | 4873062 - 4873886 | 30087.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
