Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad/nadp octopine/nopaline dehydrogenas | JCM19237_2894 | Not Available | Negative | 4857828 - 4858937 | 40036.1 |
| hypothetical protein | JCM19237_2895 | Not Available | Negative | 4859143 - 4859538 | 14698.9 |
| hypothetical protein | JCM19237_2896 | Not Available | Negative | 4859694 - 4860065 | 13694.6 |
| 23s rrna (uracil-5-) -methyltransferase rumb | JCM19237_2897 | Not Available | Positive | 4860299 - 4860775 | 17985.7 |
| 23s rrna (uracil-5-) -methyltransferase rumb | JCM19237_2898 | Not Available | Positive | 4860816 - 4861082 | 10044.3 |
| 23s rrna (uracil-5-) -methyltransferase rumb | JCM19237_2899 | Not Available | Positive | 4861079 - 4861441 | 13342.0 |
| hypothetical protein | JCM19237_2900 | Not Available | Positive | 4861686 - 4862234 | 19791.1 |
| alkaline phosphatase | JCM19237_2901 | Not Available | Positive | 4862445 - 4862774 | 11609.0 |
| alkaline phosphatase | JCM19237_2902 | Not Available | Positive | 4862798 - 4863799 | 37106.5 |
| Trna-gly | Not Available | Not Available | Positive | 4866758 - 4866833 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
