Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanyl-trna synthetase beta chain | JCM19237_2874 | Not Available | Positive | 4843078 - 4845249 | 78790.4 |
| phenylalanyl-trna synthetase beta chain | JCM19237_2875 | Not Available | Positive | 4845288 - 4845464 | 6139.29 |
| integration host factor alpha subunit | JCM19237_2876 | Not Available | Positive | 4845939 - 4846235 | 11104.2 |
| succinylglutamate desuccinylase | JCM19237_2877 | Not Available | Positive | 4846444 - 4846728 | 9998.09 |
| succinylglutamate desuccinylase | JCM19237_2878 | Not Available | Positive | 4846752 - 4847258 | 19269.7 |
| succinylglutamate desuccinylase | JCM19237_2879 | Not Available | Positive | 4847380 - 4847496 | 3926.75 |
| vitamin b12 abc transporter permease component btuc | JCM19237_2880 | Not Available | Positive | 4847629 - 4848621 | 35279.4 |
| vitamin b12 abc transporter atpase component btud | JCM19237_2881 | Not Available | Positive | 4848634 - 4849422 | 28536.5 |
| oligoendopeptidase f | JCM19237_2882 | Not Available | Positive | 4849481 - 4850110 | 22849.3 |
| oligoendopeptidase f | JCM19237_2883 | Not Available | Positive | 4850107 - 4850913 | 30065.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
