Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonyl-trna synthetase | JCM19237_2854 | Not Available | Positive | 4826259 - 4826663 | 15289.6 |
| translation initiation factor 3 | JCM19237_2855 | Not Available | Positive | 4826748 - 4827218 | 17635.5 |
| lsu ribosomal protein l35p | JCM19237_2856 | Not Available | Positive | 4827316 - 4827510 | 7250.24 |
| lsu ribosomal protein l20p | JCM19237_2857 | Not Available | Positive | 4827553 - 4827906 | 13476.6 |
| nad-dependent malic enzyme | JCM19237_2858 | Not Available | Positive | 4828515 - 4829138 | 23517.5 |
| nad-dependent malic enzyme | JCM19237_2859 | Not Available | Positive | 4829099 - 4830061 | 34832.2 |
| alkaline phosphatase | JCM19237_2860 | Not Available | Positive | 4830745 - 4832043 | 46606.5 |
| alkaline phosphatase | JCM19237_2861 | Not Available | Positive | 4832055 - 4832618 | 20007.4 |
| alkaline phosphatase | JCM19237_2862 | Not Available | Positive | 4832615 - 4832974 | 13191.3 |
| alkaline phosphatase | JCM19237_2863 | Not Available | Positive | 4832941 - 4833660 | 25821.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
