Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | JCM19237_2834 | Not Available | Positive | 4812605 - 4812727 | 4613.54 |
| mate family of mdr efflux pumps | JCM19237_2835 | Not Available | Negative | 4812975 - 4814258 | 45841.8 |
| riboflavin synthase eubacterial/eukaryotic | JCM19237_2836 | Not Available | Positive | 4814567 - 4815178 | 22279.9 |
| hypothetical protein | JCM19237_2837 | Not Available | Negative | 4815291 - 4815494 | 7596.83 |
| 2-deoxyglucose-6-phosphate hydrolase ynic | JCM19237_2838 | Not Available | Negative | 4815836 - 4816492 | 23932.9 |
| ribulosamine/erythrulosamine 3-kinase | JCM19237_2839 | Not Available | Negative | 4816627 - 4816776 | 5769.77 |
| ribulosamine/erythrulosamine 3-kinase | JCM19237_2840 | Not Available | Negative | 4816958 - 4817500 | 20862.9 |
| histidine ammonia-lyase | JCM19237_2841 | Not Available | Negative | 4817697 - 4817942 | 9065.94 |
| histidine ammonia-lyase | JCM19237_2842 | Not Available | Negative | 4817948 - 4818223 | 9317.21 |
| histidine ammonia-lyase | JCM19237_2843 | Not Available | Negative | 4818313 - 4819230 | 32413.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
