Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair protein muts | JCM19237_4495 | Not Available | Negative | 4798584 - 4799018 | 15707.0 |
| dna mismatch repair protein muts | JCM19237_4496 | Not Available | Negative | 4799015 - 4799335 | 11647.9 |
| dna mismatch repair protein muts | JCM19237_4497 | Not Available | Negative | 4799359 - 4799604 | 9069.81 |
| dna mismatch repair protein muts | JCM19237_4498 | Not Available | Negative | 4799601 - 4799972 | 13670.7 |
| c-terminal domain of cina type s | JCM19237_4499 | Not Available | Positive | 4800440 - 4800685 | 8463.91 |
| reca protein | JCM19237_4500 | Not Available | Positive | 4800809 - 4801867 | 37977.7 |
| regulatory protein recx | JCM19237_4501 | Not Available | Positive | 4801879 - 4802463 | 22533.6 |
| alanyl-trna synthetase | JCM19237_4502 | Not Available | Positive | 4802671 - 4805358 | 96968.9 |
| aspartokinase | JCM19237_4503 | Not Available | Positive | 4805374 - 4806552 | 41821.8 |
| carbon storage regulator | JCM19237_4504 | Not Available | Positive | 4806676 - 4806837 | 5775.88 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
