Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma factor rpoe negative regulatory protein rsea | JCM19237_4455 | Not Available | Positive | 4771684 - 4772352 | 24182.4 |
| sigma factor rpoe negative regulatory protein rseb precursor | JCM19237_4456 | Not Available | Positive | 4772367 - 4772873 | 18435.4 |
| sigma factor rpoe negative regulatory protein rseb precursor | JCM19237_4457 | Not Available | Positive | 4772843 - 4772956 | 4328.14 |
| sigma factor rpoe negative regulatory protein rseb precursor | JCM19237_4458 | Not Available | Positive | 4772949 - 4773338 | 14523.4 |
| sigma factor rpoe regulatory protein rsec | JCM19237_4459 | Not Available | Positive | 4773335 - 4773832 | 17060.8 |
| translation elongation factor lepa | JCM19237_4460 | Not Available | Positive | 4773912 - 4775585 | 61679.0 |
| signal peptidase i | JCM19237_4461 | Not Available | Positive | 4775911 - 4776813 | 33389.1 |
| ribonuclease iii | JCM19237_4462 | Not Available | Positive | 4776794 - 4777468 | 24880.9 |
| gtp-binding protein era | JCM19237_4463 | Not Available | Positive | 4777465 - 4778016 | 20386.8 |
| gtp-binding protein era | JCM19237_4464 | Not Available | Positive | 4778066 - 4778368 | 11630.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
