Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr-like transcriptional regulator | JCM19237_4445 | Not Available | Negative | 4765386 - 4766300 | 33751.6 |
| uncharacterized conserved protein | JCM19237_4446 | Not Available | Negative | 4766317 - 4766784 | 16866.7 |
| folate-dependent protein | JCM19237_4447 | Not Available | Negative | 4766793 - 4767074 | 10256.1 |
| folate-dependent protein | JCM19237_4448 | Not Available | Negative | 4767134 - 4767769 | 22799.2 |
| ygfy protein | JCM19237_4449 | Not Available | Positive | 4768159 - 4768419 | 9917.91 |
| hypothetical protein | JCM19237_4450 | Not Available | Positive | 4768547 - 4768702 | 6079.62 |
| hypothetical protein | JCM19237_4451 | Not Available | Positive | 4768735 - 4768911 | 6632.12 |
| l-aspartate oxidase | JCM19237_4452 | Not Available | Negative | 4769018 - 4769953 | 35451.4 |
| l-aspartate oxidase | JCM19237_4453 | Not Available | Negative | 4769857 - 4770639 | 28057.1 |
| rna polymerase sigma factor rpoe | JCM19237_4454 | Not Available | Positive | 4771081 - 4771659 | 21870.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
