Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-erythrose-4-phosphate dehydrogenase | JCM19237_4425 | Not Available | Positive | 4750012 - 4751058 | 38285.4 |
| phosphoglycerate kinase | JCM19237_4426 | Not Available | Positive | 4751145 - 4752308 | 40763.9 |
| fructose-bisphosphate aldolase class ii | JCM19237_4427 | Not Available | Positive | 4752447 - 4753523 | 38628.5 |
| hypothetical protein | JCM19237_4428 | Not Available | Positive | 4753794 - 4754699 | 32499.6 |
| protein of unknown function duf541 | JCM19237_4429 | Not Available | Positive | 4754849 - 4755547 | 25342.3 |
| d-3-phosphoglycerate dehydrogenase | JCM19237_4430 | Not Available | Negative | 4755698 - 4756627 | 33764.4 |
| hypothetical protein | JCM19237_4431 | Not Available | Positive | 4756976 - 4757116 | 5159.34 |
| ribose 5-phosphate isomerase a | JCM19237_4432 | Not Available | Negative | 4757226 - 4757885 | 23377.2 |
| 5-formyltetrahydrofolate cyclo-ligase | JCM19237_4433 | Not Available | Negative | 4758161 - 4758772 | 23367.9 |
| z-ring-associated protein zapa | JCM19237_4434 | Not Available | Negative | 4759031 - 4759333 | 11515.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
