Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| upf0301 protein yqge | JCM19237_4415 | Not Available | Negative | 4741837 - 4742400 | 20165.7 |
| glutathione synthetase | JCM19237_4416 | Not Available | Negative | 4742541 - 4743491 | 35236.7 |
| ribosomal rna small subunit methyltransferase e | JCM19237_4417 | Not Available | Negative | 4743524 - 4744255 | 26926.5 |
| putative secreted protein | JCM19237_4418 | Not Available | Negative | 4744394 - 4745152 | 28247.3 |
| protein sprt | JCM19237_4419 | Not Available | Negative | 4745334 - 4745735 | 15370.6 |
| s-adenosylmethionine synthetase | JCM19237_4420 | Not Available | Negative | 4746162 - 4747316 | 42110.3 |
| transketolase | JCM19237_4421 | Not Available | Positive | 4747726 - 4747935 | 7489.07 |
| transketolase | JCM19237_4422 | Not Available | Positive | 4747929 - 4748444 | 18432.6 |
| transketolase | JCM19237_4423 | Not Available | Positive | 4748834 - 4749355 | 19035.8 |
| transketolase | JCM19237_4424 | Not Available | Positive | 4749418 - 4749720 | 10852.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
