Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutaredoxin 2 | JCM19237_227 | Not Available | Negative | 4734964 - 4735614 | 24497.4 |
| exodeoxyribonuclease iii | JCM19237_228 | Not Available | Negative | 4735671 - 4736477 | 30495.3 |
| transglycosylase associated protein | JCM19237_229 | Not Available | Positive | 4736674 - 4736922 | 8391.52 |
| hypothetical protein | JCM19237_230 | Not Available | Negative | 4737078 - 4737260 | 6663.99 |
| glutathione s-transferase omega | JCM19237_231 | Not Available | Positive | 4737275 - 4738024 | 28433.7 |
| two component response regulator | JCM19237_232 | Not Available | Negative | 4738092 - 4738691 | 22033.5 |
| response regulator | JCM19237_233 | Not Available | Negative | 4738748 - 4739779 | 38748.2 |
| hypothetical protein | JCM19237_234 | Not Available | Negative | 4740110 - 4740238 | 5062.27 |
| Trna-tyr | Not Available | Not Available | Positive | 4741212 - 4741295 | Not Available |
| putative holliday junction resolvase yqgf | JCM19237_4414 | Not Available | Negative | 4741412 - 4741840 | 15716.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
