Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate formate-lyase | JCM19237_217 | Not Available | Negative | 4726081 - 4727412 | 50141.4 |
| hypothetical protein | JCM19237_218 | Not Available | Negative | 4727610 - 4729031 | 50498.2 |
| hypothetical protein | JCM19237_219 | Not Available | Negative | 4729664 - 4729960 | 10913.0 |
| hypothetical protein | JCM19237_220 | Not Available | Negative | 4729978 - 4731423 | 54605.9 |
| transcriptional regulator arsr family | JCM19237_221 | Not Available | Positive | 4731597 - 4731905 | 11016.4 |
| hypothetical protein | JCM19237_222 | Not Available | Negative | 4731975 - 4732106 | 4539.47 |
| (glcnac)2 abc transporter periplasmic substrate-binding protein | JCM19237_223 | Not Available | Negative | 4732099 - 4732689 | 22130.3 |
| oligopeptide abc transporter | JCM19237_224 | Not Available | Negative | 4732686 - 4733624 | 36180.9 |
| lysine-arginine-ornithine-binding periplasmic protein precursor | JCM19237_225 | Not Available | Positive | 4733951 - 4734547 | 22020.6 |
| amino acid abc transporter periplasmic amino acid-binding protein | JCM19237_226 | Not Available | Positive | 4734574 - 4734864 | 10436.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
