Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cys regulon transcriptional activator cysb | JCM19237_207 | Not Available | Positive | 4717178 - 4718083 | 34545.7 |
| pyruvate formate-lyase activating enzyme | JCM19237_208 | Not Available | Negative | 4718460 - 4718960 | 19133.9 |
| pyruvate formate-lyase activating enzyme | JCM19237_209 | Not Available | Negative | 4718957 - 4719202 | 8843.45 |
| diguanylate cyclase | JCM19237_210 | Not Available | Negative | 4719512 - 4720588 | 39800.4 |
| hypothetical protein | JCM19237_211 | Not Available | Positive | 4720577 - 4720732 | 5645.82 |
| sensory box sensor histidine kinase | JCM19237_212 | Not Available | Negative | 4720711 - 4722207 | 54182.4 |
| sensory box sensor histidine kinase | JCM19237_213 | Not Available | Negative | 4722177 - 4723751 | 59147.5 |
| sensory box histidine kinase | JCM19237_214 | Not Available | Negative | 4723748 - 4724236 | 18075.5 |
| hypothetical protein | JCM19237_215 | Not Available | Negative | 4724520 - 4724705 | 6777.37 |
| pyruvate formate-lyase | JCM19237_216 | Not Available | Negative | 4725137 - 4726069 | 34358.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
