Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerate transport regulatory protein pgtc | JCM19237_197 | Not Available | Negative | 4708626 - 4709876 | 47626.4 |
| hypothetical protein | JCM19237_198 | Not Available | Negative | 4710167 - 4710667 | 19838.6 |
| arginine/ornithine antiporter arcd | JCM19237_199 | Not Available | Positive | 4710967 - 4711629 | 25229.5 |
| nucleoside permease nupc | JCM19237_200 | Not Available | Positive | 4712069 - 4712737 | 23739.9 |
| nucleoside permease nupc | JCM19237_201 | Not Available | Positive | 4712691 - 4713254 | 19438.1 |
| formate-tetrahydrofolate ligase | JCM19237_202 | Not Available | Negative | 4713482 - 4713625 | 4946.12 |
| formate-tetrahydrofolate ligase | JCM19237_203 | Not Available | Negative | 4713613 - 4714194 | 20562.5 |
| formate-tetrahydrofolate ligase | JCM19237_204 | Not Available | Negative | 4714182 - 4714415 | 8213.01 |
| formate-tetrahydrofolate ligase | JCM19237_205 | Not Available | Negative | 4714415 - 4715233 | 29115.6 |
| formate efflux transporter | JCM19237_206 | Not Available | Negative | 4715483 - 4716958 | 53283.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
