Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | JCM19237_187 | Not Available | Negative | 4700959 - 4701189 | 8914.46 |
| hypothetical protein | JCM19237_188 | Not Available | Negative | 4701584 - 4701754 | 6367.61 |
| uncharacterized iron-regulated protein | JCM19237_189 | Not Available | Negative | 4701757 - 4702119 | 13435.0 |
| uncharacterized iron-regulated protein | JCM19237_190 | Not Available | Negative | 4702116 - 4702604 | 17640.9 |
| ribosomal rna large subunit methyltransferase a | JCM19237_191 | Not Available | Negative | 4702754 - 4703575 | 31092.0 |
| outer membrane protein c precursor | JCM19237_192 | Not Available | Positive | 4703846 - 4704913 | 39120.9 |
| phosphoglycerate transport system transcriptional regulatory protein pgta | JCM19237_193 | Not Available | Negative | 4705010 - 4706281 | 47996.6 |
| phosphoglycerate transport system sensor protein pgtb | JCM19237_194 | Not Available | Negative | 4706378 - 4706692 | 11333.8 |
| phosphoglycerate transport system sensor protein pgtb | JCM19237_195 | Not Available | Negative | 4706758 - 4708383 | 62138.4 |
| phosphoglycerate transport system sensor protein pgtb | JCM19237_196 | Not Available | Negative | 4708450 - 4708626 | 6452.05 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
