Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin domain-containing protein ec-ybbn | JCM19237_157 | Not Available | Negative | 4680809 - 4681663 | 31493.1 |
| putative nad(p)-dependent oxidoreductase ec-ybbo | JCM19237_158 | Not Available | Negative | 4682230 - 4682808 | 21410.5 |
| hypothetical protein | JCM19237_159 | Not Available | Positive | 4682898 - 4683014 | 3852.68 |
| arylesterase precursor | JCM19237_160 | Not Available | Negative | 4683073 - 4683684 | 22539.2 |
| predicted abc-type transport system | JCM19237_161 | Not Available | Positive | 4683683 - 4683835 | 4993.99 |
| predicted abc-type transport system | JCM19237_162 | Not Available | Positive | 4683835 - 4684158 | 11334.5 |
| hypothetical protein | JCM19237_163 | Not Available | Positive | 4684350 - 4684472 | 4556.52 |
| hypothetical protein | JCM19237_164 | Not Available | Positive | 4684506 - 4685225 | 26098.5 |
| hypothetical protein | JCM19237_165 | Not Available | Positive | 4685222 - 4685398 | 6252.98 |
| hypothetical protein | JCM19237_166 | Not Available | Positive | 4685376 - 4686404 | 37298.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
