Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tsac protein | JCM19237_6865 | Not Available | Positive | 4670972 - 4671550 | 20561.2 |
| coproporphyrinogen iii oxidase aerobic | JCM19237_6866 | Not Available | Positive | 4671556 - 4672461 | 33958.9 |
| shikimate 5-dehydrogenase i alpha | JCM19237_6867 | Not Available | Positive | 4672588 - 4673409 | 29326.3 |
| hypothetical protein | JCM19237_6868 | Not Available | Positive | 4673466 - 4673729 | 9963.43 |
| carbonic anhydrase family 3 | JCM19237_6869 | Not Available | Negative | 4673754 - 4674287 | 18866.7 |
| membrane protein | JCM19237_152 | Not Available | Negative | 4675057 - 4675668 | 21835.3 |
| hypothetical protein | JCM19237_153 | Not Available | Negative | 4675986 - 4676471 | 17832.1 |
| hypothetical protein | JCM19237_154 | Not Available | Negative | 4676468 - 4676776 | 11218.5 |
| copper-translocating p-type atpase | JCM19237_155 | Not Available | Negative | 4677110 - 4680142 | 105538.0 |
| hth-type transcriptional regulator cuer | JCM19237_156 | Not Available | Positive | 4680330 - 4680728 | 15209.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
