Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide deformylase | JCM19237_6855 | Not Available | Negative | 4664993 - 4665508 | 19273.2 |
| hypothetical protein | JCM19237_6856 | Not Available | Positive | 4665827 - 4666180 | 13165.9 |
| hypothetical protein | JCM19237_6857 | Not Available | Positive | 4666158 - 4666367 | 7902.5 |
| hypothetical protein | JCM19237_6858 | Not Available | Positive | 4666322 - 4666873 | 20043.9 |
| rossmann fold nucleotide-binding protein smf | JCM19237_6859 | Not Available | Positive | 4666971 - 4667960 | 35072.0 |
| protein of unknown function smg | JCM19237_6860 | Not Available | Positive | 4667963 - 4668436 | 18227.8 |
| hypothetical protein | JCM19237_6861 | Not Available | Positive | 4668533 - 4669099 | 20950.1 |
| phosphoribosylaminoimidazole carboxylase atpase subunit | JCM19237_6862 | Not Available | Negative | 4669185 - 4669754 | 20581.8 |
| phosphoribosylaminoimidazole carboxylase atpase subunit | JCM19237_6863 | Not Available | Negative | 4669745 - 4670302 | 20061.4 |
| phosphoribosylaminoimidazole carboxylase catalytic subunit | JCM19237_6864 | Not Available | Negative | 4670299 - 4670790 | 16806.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
