Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | JCM19237_6845 | Not Available | Negative | 4656895 - 4657020 | 4615.37 |
| transcriptional regulator gntr family | JCM19237_6846 | Not Available | Positive | 4657088 - 4657573 | 18186.1 |
| transcriptional regulator gntr family | JCM19237_6847 | Not Available | Positive | 4657549 - 4657764 | 8283.05 |
| hypothetical transcriptional regulator | JCM19237_6848 | Not Available | Positive | 4657922 - 4658710 | 29159.8 |
| predicted membrane protein hemolysin iii homolog | JCM19237_6849 | Not Available | Positive | 4658880 - 4659026 | 4986.2 |
| predicted membrane protein hemolysin iii homolog | JCM19237_6850 | Not Available | Positive | 4659059 - 4659541 | 17913.9 |
| potassium uptake protein trkh | JCM19237_6851 | Not Available | Negative | 4659629 - 4661074 | 51991.4 |
| trk system potassium uptake protein trka | JCM19237_6852 | Not Available | Negative | 4661080 - 4662456 | 50355.7 |
| ribosomal rna small subunit methyltransferase b | JCM19237_6853 | Not Available | Negative | 4662642 - 4663922 | 47862.4 |
| methionyl-trna formyltransferase | JCM19237_6854 | Not Available | Negative | 4664063 - 4664965 | 32442.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
