Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| periplasmic thiol:disulfide interchange protein dsba | JCM19237_6835 | Not Available | Negative | 4652667 - 4652816 | 5595.72 |
| periplasmic thiol:disulfide interchange protein dsba | JCM19237_6836 | Not Available | Negative | 4652864 - 4653268 | 14969.4 |
| yihe protein | JCM19237_6837 | Not Available | Negative | 4653352 - 4653672 | 12708.0 |
| yihe protein | JCM19237_6838 | Not Available | Negative | 4653780 - 4654325 | 20672.2 |
| hypothetical protein | JCM19237_6839 | Not Available | Positive | 4654356 - 4654478 | 4227.25 |
| type cbb3 cytochrome oxidase biogenesis protein ccog | JCM19237_6840 | Not Available | Negative | 4654475 - 4654684 | 7847.35 |
| type cbb3 cytochrome oxidase biogenesis protein ccog | JCM19237_6841 | Not Available | Negative | 4654663 - 4654785 | 4711.82 |
| type cbb3 cytochrome oxidase biogenesis protein ccog | JCM19237_6842 | Not Available | Negative | 4654782 - 4655852 | 40793.8 |
| protein yihd | JCM19237_6843 | Not Available | Negative | 4656173 - 4656439 | 10376.6 |
| hypothetical protein | JCM19237_6844 | Not Available | Negative | 4656563 - 4656739 | 6070.21 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
