Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium aphoticum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1355547 bp
Thymine Count
1364935 bp
Guanine Count
1392623 bp
Cytosine Count
1299193 bp
Genome Length
5412298 bp
Protein-coding Genes
6938 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter periplasmic amino acid-binding portion | JCM19237_6785 | Not Available | Positive | 4619725 - 4620480 | 27853.0 |
| amino acid abc transporter permease protein | JCM19237_6786 | Not Available | Positive | 4620603 - 4621274 | 25021.3 |
| abc-type polar amino acid transport system atpase component | JCM19237_6787 | Not Available | Positive | 4621271 - 4621585 | 11337.7 |
| hypothetical protein | JCM19237_6788 | Not Available | Negative | 4621674 - 4621859 | 6554.88 |
| abc-type polar amino acid transport system atpase component | JCM19237_6789 | Not Available | Positive | 4621901 - 4622038 | 4955.87 |
| ribonuclease p protein component | JCM19237_6790 | Not Available | Positive | 4622336 - 4622692 | 13593.8 |
| inner membrane protein translocase component yidc long form | JCM19237_6791 | Not Available | Positive | 4622919 - 4623275 | 12927.1 |
| inner membrane protein translocase component yidc long form | JCM19237_6792 | Not Available | Positive | 4623368 - 4623514 | 5565.68 |
| inner membrane protein translocase component yidc long form | JCM19237_6793 | Not Available | Positive | 4623499 - 4624536 | 39780.3 |
| gtpase and trna-u34 5-formylation enzyme trme | JCM19237_6794 | Not Available | Positive | 4624634 - 4625911 | 46392.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
